LAMMPS (28 Mar 2023 - Development)
  using 1 OpenMP thread(s) per MPI task
# 2d polygon nparticle bodies

units		lj
dimension       2
atom_style	body nparticle 2 6

read_data       data.body
Reading data file ...
  orthogonal box = (-15.532225 -15.532225 -0.5) to (15.532225 15.532225 0.5)
  2 by 2 by 1 MPI processor grid
  reading atoms ...
  100 atoms
  100 bodies
  read_data CPU = 0.001 seconds

velocity	all create 1.44 87287 loop geom

pair_style	body/nparticle 5.0
pair_coeff	* * 1.0 1.0

neighbor	0.5 bin
neigh_modify    every 1 delay 0 check yes

fix		1 all nve/body
#fix		1 all nvt/body temp 1.44 1.44 1.0
fix		2 all enforce2d

#compute         1 all body/local type 1 2 3
#dump            1 all local 100 dump.body index c_1[1] c_1[2] c_1[3] c_1[4]

#dump		2 all image 1000 image.*.jpg type type #		zoom 1.6 adiam 1.5 body type 1.0 0
#dump_modify    2 pad 5

thermo          100
run		10000
Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule
Neighbor list info ...
  update: every = 1 steps, delay = 0 steps, check = yes
  max neighbors/atom: 2000, page size: 100000
  master list distance cutoff = 5.5
  ghost atom cutoff = 5.5
  binsize = 2.75, bins = 12 12 1
  1 neighbor lists, perpetual/occasional/extra = 1 0 0
  (1) pair body/nparticle, perpetual
      attributes: half, newton on
      pair build: half/bin/atomonly/newton
      stencil: half/bin/2d
      bin: standard
Per MPI rank memory allocation (min/avg/max) = 5.268 | 5.268 | 5.268 Mbytes
   Step          Temp          E_pair         E_mol          TotEng         Press     
         0   1.44          -0.63799525     0              0.78760475    -0.15028724   
       100   1.6423663     -1.000111       0              0.62583161     0.16116978   
       200   1.4802732     -1.2478364      0              0.21763407     0.35464152   
       300   1.4735433     -1.3211072      0              0.13770068     0.45307413   
       400   1.5119491     -1.5930779      0             -0.096248286    0.13119532   
       500   1.5449834     -1.6300143      0             -0.10048065     0.12635421   
       600   1.621105      -1.6459036      0             -0.041009639    0.43837884   
       700   1.5959719     -1.6348501      0             -0.054837867    0.13233006   
       800   1.6862723     -1.6902254      0             -0.020815854    0.20072937   
       900   1.6771131     -1.6544493      0              0.0058926625   0.34898089   
      1000   1.5867        -1.6797024      0             -0.10886943     0.33511593   
      1100   1.7842277     -1.6814985      0              0.084886913    0.23634574   
      1200   1.7089241     -1.6766866      0              0.015148192    0.40440454   
      1300   1.6195529     -1.6078381      0             -0.004480726    0.12193834   
      1400   1.5967912     -1.563198       0              0.017625291    0.2233618    
      1500   1.6131091     -1.5731367      0              0.023841282    0.13856054   
      1600   1.6096972     -1.5741595      0              0.01944073     0.096081201  
      1700   1.6099281     -1.5875363      0              0.0062924683   0.28628509   
      1800   1.7328539     -1.5696894      0              0.14583598     0.2202503    
      1900   1.6433157     -1.6659757      0             -0.039093124    0.12006746   
      2000   1.8262234     -1.778379       0              0.029582122    0.17815935   
      2100   1.7441298     -1.704871       0              0.021817442    0.30772022   
      2200   1.7933363     -1.7246149      0              0.050788098    0.11323852   
      2300   1.7458809     -1.7186101      0              0.0098120012   0.0034260299 
      2400   1.8202324     -1.7777769      0              0.024253178    0.089077551  
      2500   1.691512      -1.6976236      0             -0.023026761    0.23901369   
      2600   1.6221153     -1.639172       0             -0.033277785    0.36881214   
      2700   1.5532388     -1.7286197      0             -0.19091334     0.1714534    
      2800   1.6648128     -1.7298542      0             -0.081689467    0.0077427265 
      2900   1.6548465     -1.7126766      0             -0.074378524    0.096972027  
      3000   1.604345      -1.7210036      0             -0.13270205     0.25227471   
      3100   1.67823       -1.6537385      0              0.0077092269   0.13198555   
      3200   1.4695581     -1.5609142      0             -0.10605159     0.28909806   
      3300   1.6778332     -1.7396206      0             -0.078565681    0.25069132   
      3400   1.7588934     -1.680043       0              0.061261505    0.28609454   
      3500   1.6699117     -1.7762865      0             -0.12307397     0.2584648    
      3600   1.5951406     -1.6611845      0             -0.081995282    0.35801267   
      3700   1.5267137     -1.6371603      0             -0.12571366     0.6116418    
      3800   1.6792717     -1.638182       0              0.024296953    0.43447072   
      3900   1.5857658     -1.6607833      0             -0.09087513     0.19479457   
      4000   1.6062152     -1.5436014      0              0.046551586    0.55118141   
      4100   1.5505892     -1.5259333      0              0.0091500726   0.49075107   
      4200   1.6933        -1.6314975      0              0.044869524    0.032970187  
      4300   1.6498743     -1.7298746      0             -0.096499053    0.14837573   
      4400   1.6535324     -1.7095911      0             -0.072593998    0.24207879   
      4500   1.835466      -1.7677327      0              0.049378652    0.18168744   
      4600   1.7346556     -1.6379956      0              0.07931344     0.49973778   
      4700   1.8050359     -1.8354358      0             -0.048450223   -0.037354111  
      4800   1.6361661     -1.7741414      0             -0.15433697     0.36409064   
      4900   1.6511224     -1.7703808      0             -0.13576956     0.23794467   
      5000   1.6249047     -1.6516641      0             -0.043008453    0.15155643   
      5100   1.6842561     -1.7128485      0             -0.045434914    0.30999124   
      5200   1.6153583     -1.630441       0             -0.031236245   -0.0083460068 
      5300   1.6806066     -1.6907533      0             -0.026952801    0.16886559   
      5400   1.7541932     -1.7161908      0              0.020460503    0.16560614   
      5500   1.8643473     -1.7810235      0              0.064680293    0.061200837  
      5600   1.5963536     -1.6145484      0             -0.034158307    0.47888104   
      5700   1.7385482     -1.7214092      0             -0.00024648083  0.22078849   
      5800   1.6726308     -1.6987799      0             -0.042875376    0.46131938   
      5900   1.7830081     -1.7766484      0             -0.011470422    0.12597212   
      6000   1.9057941     -1.719849       0              0.16688715     0.37367068   
      6100   1.6882353     -1.6888488      0             -0.0174959      0.33635307   
      6200   1.8644261     -1.7435021      0              0.10227973     0.54157135   
      6300   1.8043895     -1.8169618      0             -0.030616242    0.20596562   
      6400   1.8745855     -1.7752732      0              0.080566434    0.18365661   
      6500   1.8330698     -1.6984304      0              0.11630864     0.058109254  
      6600   1.8006644     -1.7398524      0              0.042805376    0.17509961   
      6700   1.7471279     -1.7009995      0              0.0286571      0.13439557   
      6800   1.7077006     -1.7462928      0             -0.055669263    0.16474264   
      6900   1.7602738     -1.8336138      0             -0.090942793    0.37533762   
      7000   1.6962037     -1.7746381      0             -0.095396485    0.28764793   
      7100   1.6040275     -1.652448       0             -0.064460796    0.47621288   
      7200   1.7595892     -1.6260406      0              0.11595278     0.55174207   
      7300   1.8031743     -1.7436876      0              0.041454978    0.35699364   
      7400   1.6575485     -1.5994276      0              0.041545422    0.38389368   
      7500   1.8539985     -1.6888181      0              0.14664046     0.25524239   
      7600   1.6721617     -1.6819419      0             -0.026501825    0.18077253   
      7700   1.4696976     -1.5368001      0             -0.081799475    0.37392274   
      7800   1.6532125     -1.6604679      0             -0.023787555    0.25683053   
      7900   1.5890818     -1.711541       0             -0.13834993     0.28943398   
      8000   1.6729844     -1.674981       0             -0.01872644     0.1725141    
      8100   1.6041427     -1.7188678      0             -0.13076654     0.22948004   
      8200   1.7000012     -1.5584259      0              0.12457532     0.82913741   
      8300   1.6662649     -1.8411986      0             -0.19159634     0.40893581   
      8400   1.6031593     -1.8225478      0             -0.23542004     0.21287004   
      8500   1.6615542     -1.685667       0             -0.040728376    0.40063656   
      8600   1.6094262     -1.7942547      0             -0.20092282     0.28738874   
      8700   1.6040855     -1.6483081      0             -0.060263486    0.22614876   
      8800   1.6658931     -1.6751256      0             -0.025891437    0.027723314  
      8900   1.7989105     -1.7318497      0              0.049071648    0.27645866   
      9000   1.8242262     -1.6879124      0              0.11807158     0.21701732   
      9100   1.6795701     -1.6926952      0             -0.029920813    0.28702517   
      9200   1.8093352     -1.8430841      0             -0.051842329    0.04182244   
      9300   1.7654746     -1.7580453      0             -0.010225436    0.41460279   
      9400   1.9494599     -1.7162713      0              0.21369396     0.22445951   
      9500   1.8650839     -1.6517629      0              0.19467014     0.34042974   
      9600   1.8080088     -1.651068       0              0.13886064     0.38597156   
      9700   1.757349      -1.6397227      0              0.10005277     0.12075072   
      9800   1.8111959     -1.7155458      0              0.077538075    0.023545696  
      9900   1.7255423     -1.7364511      0             -0.02816423     0.24284116   
     10000   1.794001      -1.7545014      0              0.021559597    0.15092078   
Loop time of 0.461554 on 4 procs for 10000 steps with 100 atoms

Performance: 9359693.727 tau/day, 21665.958 timesteps/s, 2.167 Matom-step/s
93.5% CPU use with 4 MPI tasks x 1 OpenMP threads

MPI task timing breakdown:
Section |  min time  |  avg time  |  max time  |%varavg| %total
---------------------------------------------------------------
Pair    | 0.21335    | 0.24947    | 0.30554    |   7.2 | 54.05
Neigh   | 0.0016861  | 0.0018238  | 0.0019357  |   0.2 |  0.40
Comm    | 0.078727   | 0.14542    | 0.19247    |  10.9 | 31.51
Output  | 0.00086191 | 0.0026451  | 0.0079866  |   6.0 |  0.57
Modify  | 0.028228   | 0.029642   | 0.030811   |   0.5 |  6.42
Other   |            | 0.03255    |            |       |  7.05

Nlocal:             25 ave          28 max          21 min
Histogram: 1 0 0 0 0 1 0 1 0 1
Nghost:           47.5 ave          50 max          46 min
Histogram: 2 0 0 0 0 1 0 0 0 1
Neighs:         117.25 ave         144 max          91 min
Histogram: 1 0 0 1 0 0 1 0 0 1

Total # of neighbors = 469
Ave neighs/atom = 4.69
Neighbor list builds = 494
Dangerous builds = 0
Total wall time: 0:00:00
